BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023F08SP1|AL428091
(956 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1519 0.0
3x_Contig1530 1227 0.0
>3x_Contig1461
Length = 5478
Score = 1519 bits (765), Expect = 0.0
Identities = 848/863 (98%), Gaps = 10/863 (1%)
Strand = Plus / Minus
Query: 3 cckactagggatcgggtggtgtttttcttatgacccactcggcaccttacgagaaatcaa 62
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 ccgactagggatcgggtggtgtttttcttatgacccactcggcaccttacgagaaatcaa 947
Query: 63 agtctttgggttctggggggagtatggtcgcaaggctgaaacttaaaggaattgacggaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 agtctttgggttctggggggagtatggtcgcaaggctgaaacttaaaggaattgacggaa 887
Query: 123 gggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaactcaccag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 gggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaactcaccag 827
Query: 183 gtccagacacaataaggattgacagattgagagctctttcttgattttgtgggtggtggt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 gtccagacacaataaggattgacagattgagagctctttcttgattttgtgggtggtggt 767
Query: 243 gcatggccgttcttagttggtggagtgatttgtctgcttaattgcgataacgaacgagac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 gcatggccgttcttagttggtggagtgatttgtctgcttaattgcgataacgaacgagac 707
Query: 303 cttaacctactaaatagggttgctggcacttgccggttgactcttcttagag-ggactat 361
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 706 cttaacctactaaatagggttgctggcacttgccggttgactcttcttagagaggactat 647
Query: 362 cggtttcaag-ccgatg-gaagtttgaggcaataacaggtctgtgatgcccttagacgtt 419
|||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 cggtttcaagaccgatgagaagtttgaggcaataacaggtctgtgatgcccttagacgtt 587
Query: 420 ctgggccgcacgcgcgctacactgacggagccagcgagtacaaccttggccgagaggtct 479
||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ctgggccgcacgcacgctactgtgacggagccagcgagtacaaccttggccgagaggtct 527
Query: 480 gggtaatcttgtgaaactccgtcgtgctggggatagagcattgtaattattgctcttcaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gggtaatcttgtgaaactccgtcgtgctggggatagagcattgtaattattgctcttcaa 467
Query: 540 cgaggaattcctagtaagcgcaagtcatcagcttgcgttgattacgtccctgccctttgt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 cgaggaattcctagtaagcgcaagtcatcagcttgcgttgattacgtccctgccctttgt 407
Query: 600 acacaccgcccgtcgctagtaccgattgaatggcttagtgaggcctcaggatttgcttag 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 acacaccgcccgtcgctagtaccgattgaatggcttagtgaggcctcaggatttgcttag 347
Query: 660 agaagggggcaactccatctcagagcgaagaatctggtcaaac-ttggtcatttagagga 718
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 346 ggaagggggcaactccatctcagagcgaagaatctggtcaaacattggtcatttagagga 287
Query: 719 actaaaagtcgtaacaaggtttccgtagtgaacctgcggaaggatcattaaagattatga 778
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||| || |
Sbjct: 286 actaaaagtcgtaacaaggtttccgtagtgaacctgcgga-ggatcattaa-gat-at-a 231
Query: 779 atgagtagattactgggggaatcgctgaatatggcctgcgcttaattgcgcggctaattc 838
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 atgagtagat-actgggggaatcgctgaatatggcctgcgcttaattgcgcggctaattc 172
Query: 839 ttgattttctgct-atcagtttt 860
||||||||||||| |||||||||
Sbjct: 171 ttgattttctgctaatcagtttt 149
>3x_Contig1530
Length = 6216
Score = 1227 bits (618), Expect = 0.0
Identities = 863/944 (91%), Gaps = 1/944 (0%)
Strand = Plus / Plus
Query: 14 tcgggtggtgtttttcttatgacccactcggcaccttacgagaaatcaaagtctttgggt 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tcgggtggtgtttttcttatgacccactcggcaccttacgagaaatcaaagtctttgggt 742
Query: 74 tctggggggagtatggtcgcaaggctgaaa-cttaaaggaattgacggaagggcaccacc 132
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 743 tctggggggagtatggtcgcaaggctgaaaacttaaaggaattgacggaagggcaccacc 802
Query: 133 aggagtggagcctgcggcttaatttgactcaacacggggaaactcaccaggtccagacac 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 aggagtggagcctgcggcttaatttgactcaacacggggaaactcaccaggtccagacac 862
Query: 193 aataaggattgacagattgagagctctttcttgattttgtgggtggtggtgcatggccgt 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 aataaggattgacagattgagagctctttcttgattttgtgggtggtggtgcatggccgt 922
Query: 253 tcttagttggtggagtgatttgtctgcttaattgcgataacgaacgagaccttaacctac 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 tcttagttggtggagtgatttgtctgcttaattgcgataacgaacgagaccttaacctac 982
Query: 313 taaatagggttgctggcacttgccggttgactcttcttagagggactatcggtttcaagc 372
|||||| |||||| |||||| || ||| |||||||||| | |||||| ||||||||
Sbjct: 983 taaataaagttgctagcacttcccagttaactcttcttaaaaatactatcattttcaagc 1042
Query: 373 cgatggaagtttgaggcaataacaggtctgtgatgcccttagacgttctgggccgcacgc 432
| || || ||| | ||||||||| ||| | ||||||||| |||||||| ||| |||||
Sbjct: 1043 caataaaattttaaagcaataacacatctataatgcccttaaacgttctgtgccccacgc 1102
Query: 433 gcgctacactgacggagccagcgagtacaaccttggccgagaggtctgggtaatcttgtg 492
|||||||||| || |||||||| ||||||||||| ||| | | ||| ||||||| |
Sbjct: 1103 gcgctacactaacagagccagcaagtacaaccttagccaaaaattctatttaatctttta 1162
Query: 493 aaactccgtcgtgctggggatagagcattgtaattattgctcttcaacgaggaattccta 552
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163 aaactccttcgtgctgaaaatagagcattgtaattattgctcttcaacgaggaattccta 1222
Query: 553 gtaagcgcaagtcatcagcttgcgttgattacgtccctgccctttgtacacaccgcccgt 612
|||||||||| |||||||||||| || ||||| ||||| |||||| |||||||||||| |
Sbjct: 1223 gtaagcgcaattcatcagcttgcttttattacttcccttccctttttacacaccgccctt 1282
Query: 613 cgctagtaccgattgaatggcttagtgaggcctcaggatttgcttagagaagggggcaac 672
||||| |||| ||| ||| ||||| ||| |||||| |||||||||||||||||||||||
Sbjct: 1283 cgctattacctatttaatcgcttattgacgcctcactatttgcttagagaagggggcaac 1342
Query: 673 tccatctcagagcgaagaatctggtcaaacttggtcatttagaggaactaaaagtcgtaa 732
|||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1343 tccatctcagagcgaaaaatctggtcaaacttggtcatttagaggaactaaaattcgtaa 1402
Query: 733 caaggtttccgtagtgaacctgcggaaggatcattaaagattatgaatgagtagattact 792
||||||||||||||||||||||||||| ||||||||| ||||| ||| |||| ||||||
Sbjct: 1403 caaggtttccgtagtgaacctgcggaactatcattaaatattataaataagtaaattact 1462
Query: 793 gggggaatcgctgaatatggcctgcgcttaattgcgcggctaattcttgattttctgcta 852
|||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1463 gggggaatcgctaaatatcgcctgcgcttaattgcgcggctaattcttaattttctgcta 1522
Query: 853 tcagttttctttctctcatcctaaacacaatggagttttttctctatgaactacttycct 912
||| ||||||||||||||||||||||||||| | |||||||||||| |||||||| |||
Sbjct: 1523 tcaattttctttctctcatcctaaacacaataaatttttttctctataaactacttccct 1582
Query: 913 ggagagctcgtctctccagtggacataaacacaaacaacatttt 956
| ||||| |||||||||| ||||||||||||||||||||||
Sbjct: 1583 aaaaagctcttctctccagttaacataaacacaaacaacatttt 1626
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4573
Number of Sequences: 1807
Number of extensions: 4573
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 2
length of query: 956
length of database: 10,358,551
effective HSP length: 16
effective length of query: 940
effective length of database: 10,329,639
effective search space: 9709860660
effective search space used: 9709860660
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)